Research workbench

Crystal structure of avrptob (436-553)

Analyse Crystal structure of avrptob (436-553) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2FD4
Type: protein
Length: 105 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Avirulence protein avrptob
UniProt: Q8RSY1

Structure

x-ray diffraction · 1 distinct chain · 19% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Avirulence protein avrptob	protein	105	19% helix, 22% strand	Q8RSY1

Compared structures

2FD4 · Crystal Structure of AvrPtoB (436-553) · the same entry in another collection · chain A against A, TM-score 1.00
Q8RSY1 · AlphaFold monomer V2.0 prediction for effector protein HOPAB2 (Q8RSY1) · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8RSY1
Elsewhere: RCSB PDB 2FD4 · PDBe 2FD4 · UniProt Q8RSY1

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.