Research workbench

Crystal structure of oxidized flavodoxin from a red alga chondrus crispus refined at 1.8 ångströms resolution: description of the flavin mononucleotide binding site

Analyse Crystal structure of oxidized flavodoxin from a red alga chondrus crispus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2FCR
Type: protein
Length: 173 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Flavodoxin
UniProt: P14070
Ligands: FMN
Pockets: 1 · best druggability 0.47

Structure

x-ray diffraction · 1 distinct chain · 38% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Flavodoxin	protein	173	38% helix, 20% strand	P14070

Ligands and binding sites

FMN · Flavin mononucleotide · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	97	0.47	0.81	23	FMN

Compared structures

2FCR · Crystal structure of oxidized flavodoxin from a red alga chondrus crispus refined at 1.8… · the same entry in another collection · chain A against A, TM-score 1.00
P14070 · AlphaFold monomer V2.0 prediction for flavodoxin (P14070) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P14070
Elsewhere: RCSB PDB 2FCR · PDBe 2FCR · UniProt P14070

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.