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Crystal structure of the monomeric porin ompg

Analyse Crystal structure of the monomeric porin ompg in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2F1C
Type: protein
Length: 252 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Outer membrane protein G
UniProt: P76045
Pockets: 1 · best druggability 0.62

Structure

x-ray diffraction · 1 distinct chain · 2% helix, 71% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
X	Outer membrane protein G	protein	252	2% helix, 71% strand	P76045

Ligands and binding sites

C8E · (hydroxyethyloxy)tri(ethyloxy)octane · additive · 2 copies · chains X

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	699	0.62	0.73	64	empty

Compared structures

2F1C · Crystal structure of the monomeric porin OmpG · the same entry in another collection · chain X against X, TM-score 1.00
P76045 · AlphaFold monomer V2.0 prediction for outer membrane porin G (P76045) · a predicted model of the same protein · chain X against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P76045
Elsewhere: RCSB PDB 2F1C · PDBe 2F1C · UniProt P76045

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