Research workbench
NMR structure of the RNA binding domain of human fox-1 in complex with ugcaugu
Analyse NMR structure of the RNA binding domain of human fox-1 in complex with ugcaugu in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2ERR
- Type
- protein + RNA
- Length
- 95 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ugcaugu; Ataxin-2-binding protein 1
- UniProt
- Q9NWB1
Structure
solution nmr · 2 distinct chains · 23% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | Ugcaugu | rna | 7 | — | — |
| A | Ataxin-2-binding protein 1 | protein | 88 | 23% helix, 26% strand | Q9NWB1 |
Interfaces
1 interface between chains.
- B–A · 951 Ų buried · 29 hydrogen bonds · protein-nucleic
Compared structures
- 2ERR · NMR Structure of the RNA Binding Domain of Human Fox-1 in Complex with UGCAUGU · the same entry in another collection · chain B against B, TM-score 1.00
- Q9NWB1 · AlphaFold monomer V2.0 prediction for RNA binding protein fox-1 homolog 1 (Q9NWB1) · a predicted model of the same protein · chain A against A, TM-score 0.79
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NWB1
- Elsewhere: RCSB PDB 2ERR · PDBe 2ERR · UniProt Q9NWB1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.