Research workbench
Solution structure of the P55 PDZ T85C domain complexed with the glycophorin C F127C peptide
Analyse Solution structure of the P55 PDZ T85C domain complexed with the glycophorin C… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2EJY
- Type
- protein
- Length
- 91 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 55 kda erythrocyte membrane protein; Glycophorin C
- UniProt
- Q00013, P04921
Structure
solution nmr · 2 distinct chains · 16% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 55 kda erythrocyte membrane protein | protein | 85 | 18% helix, 38% strand | Q00013 |
| B | Glycophorin C | protein | 6 | 0% helix, 33% strand | P04921 |
Interfaces
1 interface between chains.
- A–B · 487 Ų buried · 8 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 2EJY · Solution structure of the p55 PDZ T85C domain complexed with the glycophorin C F127C… · the same entry in another collection · chain A against A, TM-score 1.00
- Q00013 · AlphaFold monomer V2.0 prediction for 55 kda erythrocyte membrane protein (Q00013) · a predicted model of the same protein · chain A against A, TM-score 0.82
- P04921 · AlphaFold monomer V2.0 prediction for glycophorin-C (P04921) · a predicted model of the same protein · chain B against A, TM-score 0.36
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q00013
- Every structure of UniProt P04921
- Elsewhere: RCSB PDB 2EJY · PDBe 2EJY · UniProt Q00013 · UniProt P04921
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