Research workbench

Crystal structure of ST2348, a hypothetical protein with cbs domains from sulfolobus tokodaii STRAIN7

Analyse Crystal structure of ST2348, a hypothetical protein with cbs domains from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2EF7
Type: protein
Length: 253 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein ST2348
UniProt: Q96Y20
Pockets: 2 · best druggability 0.47

Structure

x-ray diffraction · 2 distinct chains · 37% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hypothetical protein ST2348	protein	127	38% helix, 28% strand	Q96Y20
B	Hypothetical protein ST2348	protein	126	36% helix, 28% strand	Q96Y20

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	157	0.47	0.76	27	empty
2	117	0.39	0.75	23	empty

Interfaces

1 interface between chains.

A–B · 784 Å² buried · 6 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 12 modified (engineered).

Compared structures

2EF7 · Crystal structure of ST2348, a hypothetical protein with CBS domains from Sulfolobus… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q96Y20
Elsewhere: RCSB PDB 2EF7 · PDBe 2EF7 · UniProt Q96Y20

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.