Research workbench
Solution structure of the ring domain of the human ring finger protein 141
Analyse Solution structure of the ring domain of the human ring finger protein 141 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2ECN
- Type
- protein
- Length
- 70 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ring finger protein 141
- UniProt
- Q8WVD5
- Ligands
- ZN
- Pockets
- 1 · best druggability 0.43
Structure
solution nmr · 1 distinct chain · 16% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ring finger protein 141 | protein | 70 | 16% helix, 9% strand | Q8WVD5 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 81 | 0.43 | 0.79 | 15 | empty |
Compared structures
- 2ECN · Solution structure of the RING domain of the human RING finger protein 141 · the same entry in another collection · chain A against A, TM-score 1.00
- Q8WVD5 · AlphaFold monomer V2.0 prediction for ring finger protein 141 (Q8WVD5) · a predicted model of the same protein · chain A against A, TM-score 0.47
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8WVD5
- Elsewhere: RCSB PDB 2ECN · PDBe 2ECN · UniProt Q8WVD5
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