Research workbench
X-ray structure of hypothetical selenium-binding protein from sulfolobus tokodaii, ST0059
Analyse X-ray structure of hypothetical selenium-binding protein from sulfolobus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2ECE
- Type
- protein
- Length
- 455 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 462AA long hypothetical selenium-binding protein
- UniProt
- Q976Y0
- Pockets
- 3 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 8% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 462AA long hypothetical selenium-binding protein | protein | 455 | 8% helix, 41% strand | Q976Y0 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 77 | 0.67 | 0.92 | 23 | empty |
| 2 | 75 | 0.34 | 0.76 | 18 | empty |
| 3 | 53 | 0.32 | 0.76 | 17 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 2ECE · X-ray structure of hypothetical selenium-binding protein from Sulfolobus tokodaii, ST0059 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q976Y0
- Elsewhere: RCSB PDB 2ECE · PDBe 2ECE · UniProt Q976Y0
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