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Solution structure of mouse lipocalin-type prostaglandin D synthase

Analyse Solution structure of mouse lipocalin-type prostaglandin D synthase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2E4J
Type: protein
Length: 167 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Prostaglandin-H2 D-isomerase
EC: 5.3.99.2
UniProt: O09114
Pockets: 1 · best druggability 0.76

Structure

solution nmr · 1 distinct chain · 14% helix, 36% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Prostaglandin-H2 D-isomerase (EC 5.3.99.2)	protein	167	14% helix, 36% strand	O09114

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	602	0.76	0.82	53	empty

Compared structures

2E4J · Solution Structure of mouse Lipocalin-type Prostaglandin D Synthase · the same entry in another collection · chain A against A, TM-score 1.00
O09114 · AlphaFold monomer V2.0 prediction for prostaglandin-H2 D-isomerase (O09114) · a predicted model of the same protein · chain A against A, TM-score 0.80

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O09114
Elsewhere: RCSB PDB 2E4J · PDBe 2E4J · UniProt O09114

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