Research workbench
Crystal structure of rubredoxin from desulfovibrio gigas to ultra-high 0.68 a resolution
Analyse Crystal structure of rubredoxin from desulfovibrio gigas to ultra-high 0.68 a… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2DSX
- Type
- protein
- Length
- 52 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Rubredoxin
- UniProt
- P00270
- Ligands
- FE
Structure
x-ray diffraction · 1 distinct chain · 17% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rubredoxin | protein | 52 | 17% helix, 23% strand | P00270 |
Ligands and binding sites
- FE · Fe (III) ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 2DSX · Crystal structure of rubredoxin from Desulfovibrio gigas to ultra-high 0.68 A resolution · the same entry in another collection · chain A against A, TM-score 1.00
- P00270 · AlphaFold monomer V2.0 prediction for rubredoxin (P00270) · a predicted model of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00270
- Elsewhere: RCSB PDB 2DSX · PDBe 2DSX · UniProt P00270
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