Research workbench
X-ray crystal structure of protein yopt from bacillus subtilis. northeast structural genomics consortium target SR412
Analyse X-ray crystal structure of protein yopt from bacillus subtilis. northeast… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2DLB
- Type
- protein
- Length
- 140 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Yopt
- UniProt
- O34498
Structure
x-ray diffraction · 1 distinct chain · 19% helix, 57% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Yopt | protein | 70 | 19% helix, 57% strand | O34498 |
Interfaces
1 interface between chains.
- A–B · 2879 Ų buried · 78 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 modified (engineered).
Compared structures
- 2DLB · X-ray Crystal Structure of Protein yopT from Bacillus subtilis. Northeast Structural… · the same entry in another collection · chain A against A, TM-score 1.00
- O34498 · AlphaFold monomer V2.0 prediction for spbeta prophage-derived uncharacterized protein… · a predicted model of the same protein · chain A against A, TM-score 0.64
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O34498
- Elsewhere: RCSB PDB 2DLB · PDBe 2DLB · UniProt O34498
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