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Solution structures of the PDZ domain of human unnamed protein product

Analyse Solution structures of the PDZ domain of human unnamed protein product in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2DJT
Type: protein
Length: 104 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Unnamed protein product
UniProt: Q9H6Y5
Pockets: 1 · best druggability 0.39

Structure

solution nmr · 1 distinct chain · 14% helix, 31% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Unnamed protein product	protein	104	14% helix, 31% strand	Q9H6Y5

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	72	0.39	0.78	15	empty

Compared structures

2DJT · Solution structures of the PDZ domain of human unnamed protein product · the same entry in another collection · chain A against A, TM-score 1.00
Q9H6Y5 · AlphaFold monomer V2.0 prediction for PDZ domain-containing protein magix (Q9H6Y5) · a predicted model of the same protein · chain A against A, TM-score 0.80

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9H6Y5
Elsewhere: RCSB PDB 2DJT · PDBe 2DJT · UniProt Q9H6Y5

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