Research workbench
NMR structure of the HIV-2 nucleocapsid protein
Analyse NMR structure of the HIV-2 nucleocapsid protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2DI2
- Type
- protein
- Length
- 29 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nucleocapsid protein P7
- UniProt
- P18041
- Ligands
- ZN
Structure
solution nmr · 1 distinct chain · 10% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleocapsid protein P7 | protein | 29 | 10% helix, 0% strand | P18041 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 2DI2 · NMR structure of the HIV-2 nucleocapsid protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P18041
- Elsewhere: RCSB PDB 2DI2 · PDBe 2DI2 · UniProt P18041
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