Research workbench
Solution structure of nucleic acid binding protein CUGBP1AB and its binding study with DNA and RNA
Analyse Solution structure of nucleic acid binding protein CUGBP1AB and its binding… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2DHS
- Type
- protein
- Length
- 187 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cug triplet repeat RNA-binding protein 1
- UniProt
- Q92879
- Pockets
- 3 · best druggability 0.39
Structure
solution nmr · 1 distinct chain · 25% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cug triplet repeat RNA-binding protein 1 | protein | 187 | 25% helix, 25% strand | Q92879 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 66 | 0.39 | 0.78 | 15 | empty |
| 2 | 62 | 0.37 | 0.78 | 15 | empty |
| 3 | 109 | 0.37 | 0.74 | 25 | empty |
Compared structures
- 2DHS · Solution Structure of Nucleic Acid Binding Protein CUGBP1ab and its Binding Study with… · the same entry in another collection · chain A against A, TM-score 1.00
- Q92879 · AlphaFold monomer V2.0 prediction for cugbp elav-like family member 1 (Q92879) · a predicted model of the same protein · chain A against A, TM-score 0.49
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q92879
- Elsewhere: RCSB PDB 2DHS · PDBe 2DHS · UniProt Q92879
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.