Research workbench
GCN4 basic domain, leucine zipper complexed with ATF/CREB site DNA
Analyse GCN4 basic domain, leucine zipper complexed with ATF/CREB site DNA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2DGC
- Type
- protein + DNA
- Length
- 68 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'- D(*TP*GP*GP*AP*GP*AP*TP*GP*AP*CP*GP*TP*CP*AP*TP*CP*T P*CP*C)-3'); Protein (GCN4)
- UniProt
- P03069
Structure
x-ray diffraction · 2 distinct chains · 96% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | DNA (5'- D(*TP*GP*GP*AP*GP*AP*TP*GP*AP*CP*GP*TP*CP*AP*TP*CP*T P*CP*C)-3') | dna | 19 | — | — |
| A | Protein (GCN4) | protein | 49 | 96% helix, 0% strand | P03069 |
Interfaces
1 interface between chains.
- B–A · 372 Ų buried · 9 hydrogen bonds · protein-nucleic
Compared structures
- 2DGC · GCN4 basic domain, leucine zipper complexed with ATF/CREB site DNA · the same entry in another collection · chain B against B, TM-score 1.00
- P03069 · AlphaFold monomer V2.0 prediction for general control transcription factor GCN4 (P03069) · a predicted model of the same protein · chain A against A, TM-score 0.85
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03069
- Elsewhere: RCSB PDB 2DGC · PDBe 2DGC · UniProt P03069
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