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N-terminal fragment of axonin-1 from chicken

Analyse N-terminal fragment of axonin-1 from chicken in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1CS6
Type: protein
Length: 382 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Axonin-1
UniProt: P28685

Structure

x-ray diffraction · 1 distinct chain · 3% helix, 56% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Axonin-1	protein	382	3% helix, 56% strand	P28685

Ligands and binding sites

GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

1CS6 · N-terminal fragment of axonin-1 from chicken · the same entry in another collection · chain A against A, TM-score 1.00
P28685 · AlphaFold monomer V2.0 prediction for contactin-2 (P28685) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P28685
Elsewhere: RCSB PDB 1CS6 · PDBe 1CS6 · UniProt P28685

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