Research workbench
NMR solution structure of the dermaseptin antimicrobial peptide analog NC12-K4S4(1-13)A
Analyse NMR solution structure of the dermaseptin antimicrobial peptide analog… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2DCX
- Type
- protein
- Length
- 13 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Dermaseptin-4
- UniProt
- P80280
- Ligands
- DOA, NH2
Structure
solution nmr · 1 distinct chain · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Dermaseptin-4 | protein | 13 | 0% helix, 0% strand | P80280 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 covalent (covalent ligand).
Compared structures
- 2DCX · NMR solution structure of the Dermaseptin antimicrobial peptide analog NC12-K4S4(1-13)a · the same entry in another collection · chain A against A, TM-score 1.00
- P80280 · AlphaFold monomer V2.0 prediction for dermaseptin-S4 (P80280) · a predicted model of the same protein · chain A against A, TM-score 0.32
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P80280
- Elsewhere: RCSB PDB 2DCX · PDBe 2DCX · UniProt P80280
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