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Solution structure of the pH domain of docking protein 2 from human

Analyse Solution structure of the pH domain of docking protein 2 from human in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2D9W
Type: protein
Length: 127 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Docking protein 2
UniProt: O60496
Pockets: 1 · best druggability 0.30

Structure

solution nmr · 1 distinct chain · 14% helix, 35% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Docking protein 2	protein	127	14% helix, 35% strand	O60496

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	76	0.30	0.73	18	empty

Compared structures

2D9W · Solution structure of the PH domain of Docking protein 2 from human · the same entry in another collection · chain A against A, TM-score 1.00
O60496 · AlphaFold monomer V2.0 prediction for docking protein 2 (O60496) · a predicted model of the same protein · chain A against A, TM-score 0.74

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O60496
Elsewhere: RCSB PDB 2D9W · PDBe 2D9W · UniProt O60496

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