Research workbench
Crystal structure of conserved hypothetical protein, TTHA0068 from thermus thermophilus HB8
Analyse Crystal structure of conserved hypothetical protein, TTHA0068 from thermus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2CXD
- Type
- protein
- Length
- 188 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Conserved hypothetical protein, TTHA0068
- UniProt
- Q5SM75
- Pockets
- 1 · best druggability 0.39
Structure
x-ray diffraction · 1 distinct chain · 71% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Conserved hypothetical protein, TTHA0068 | protein | 94 | 71% helix, 2% strand | Q5SM75 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 52 | 0.39 | 0.82 | 12 | empty |
Interfaces
1 interface between chains.
- A–B · 636 Ų buried · 6 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 2CXD · Crystal structure of conserved hypothetical protein, TTHA0068 from Thermus thermophilus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SM75
- Elsewhere: RCSB PDB 2CXD · PDBe 2CXD · UniProt Q5SM75
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