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Analysis of side-chain organization on a refined model of charybdotoxin: structural and functional implications

Analyse Analysis of side-chain organization on a refined model of charybdotoxin… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2CRD
Type
protein
Length
37 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Charybdotoxin
UniProt
P13487

Structure

solution nmr · 1 distinct chain · 27% helix, 19% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACharybdotoxinprotein3727% helix, 19% strandP13487

Modifications

Observed in the structure: 3 disulfide, 1 modified (disulfide, cyclization).

Compared structures

  • 2CRD · Analysis of side-chain organization on a refined model of charybdotoxin: structural and… · the same entry in another collection · chain A against A, TM-score 1.00
  • P13487 · AlphaFold monomer V2.0 prediction for potassium channel toxin alpha- ktx 1.1 (P13487) · a predicted model of the same protein · chain A against A, TM-score 0.78

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