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Canavalin from jack bean

Analyse Canavalin from jack bean in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2CAU
Type: protein
Length: 344 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein (canavalin)
UniProt: P50477
Pockets: 2 · best druggability 0.73

Structure

x-ray diffraction · 1 distinct chain · 17% helix, 44% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein (canavalin)	protein	344	17% helix, 44% strand	P50477

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	54	0.73	0.99	15	empty
2	82	0.40	0.77	17	empty

Compared structures

2CAU · Canavalin from jack bean · the same entry in another collection · chain A against A, TM-score 1.00
P50477 · AlphaFold monomer V2.0 prediction for canavalin (P50477) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P50477
Elsewhere: RCSB PDB 2CAU · PDBe 2CAU · UniProt P50477

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