Research workbench
Crystal structure of the sialyltransferase PM0188
Analyse Crystal structure of the sialyltransferase PM0188 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2C83
- Type
- protein
- Length
- 391 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein PM0188
- UniProt
- Q9CP67
- Pockets
- 5 · best druggability 0.54
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein PM0188 | protein | 391 | 43% helix, 18% strand | Q9CP67 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 251 | 0.54 | 0.76 | 34 | empty |
| 2 | 112 | 0.48 | 0.80 | 16 | empty |
| 3 | 67 | 0.34 | 0.76 | 15 | empty |
| 4 | 60 | 0.29 | 0.75 | 16 | empty |
| 5 | 58 | 0.28 | 0.74 | 18 | empty |
Modifications
Observed in the structure: 7 modified (engineered).
Compared structures
- 2C83 · Crystal structure of the sialyltransferase PM0188 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9CP67
- Elsewhere: RCSB PDB 2C83 · PDBe 2C83 · UniProt Q9CP67
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