Research workbench
Crystal structure of viral macrophage inflammatory protein-II
Analyse Crystal structure of viral macrophage inflammatory protein-II in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1CM9
- Type
- protein
- Length
- 135 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein (viral macrophage inflammatory protein-II)
- UniProt
- Q98157
Structure
x-ray diffraction · 2 distinct chains · 18% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein (viral macrophage inflammatory protein-II) | protein | 68 | 18% helix, 28% strand | Q98157 |
| B | Protein (viral macrophage inflammatory protein-II) | protein | 67 | 18% helix, 28% strand | Q98157 |
Interfaces
1 interface between chains.
- A–B · 893 Ų buried · 13 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 disulfide, 2 modified (disulfide, engineered).
Compared structures
- 1CM9 · Crystal structure of viral macrophage inflammatory protein-II · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q98157
- Elsewhere: RCSB PDB 1CM9 · PDBe 1CM9 · UniProt Q98157
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