Research workbench
The structure of bovine pancreatic prophospholipase A2 at 3.0 ångströms resolution
Analyse The structure of bovine pancreatic prophospholipase A2 at 3.0 ångströms… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2BP2
- Type
- protein
- Length
- 123 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Phospholipase A2
- UniProt
- P00593
- Pockets
- 1 · best druggability 0.65
Structure
x-ray diffraction · 1 distinct chain · 52% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phospholipase A2 | protein | 123 | 52% helix, 9% strand | P00593 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 238 | 0.65 | 0.83 | 25 | empty |
Modifications
Observed in the structure: 7 disulfide (disulfide).
Compared structures
- 2BP2 · The structure of bovine pancreatic prophospholipase A2 at 3.0 ångströms resolution · the same entry in another collection · chain A against A, TM-score 1.00
- P00593 · AlphaFold monomer V2.0 prediction for phospholipase A2 (P00593) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00593
- Elsewhere: RCSB PDB 2BP2 · PDBe 2BP2 · UniProt P00593
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