Research workbench
Crystal structures of ferric-no complexes of fungal nitric oxide reductase and its SER286 mutants at cryogenic temperature
Analyse Crystal structures of ferric-no complexes of fungal nitric oxide reductase and… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1CL6
- Type
- protein
- Length
- 399 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cytochrome P450
- EC
- 1.14.-.-
- UniProt
- P23295
- Ligands
- HEM, NO
- Pockets
- 4 · best druggability 0.81
Structure
x-ray diffraction · 1 distinct chain · 51% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cytochrome P450 (EC 1.14.-.-) | protein | 399 | 51% helix, 10% strand | P23295 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1043 | 0.81 | 0.82 | 86 | HEM, NO |
| 2 | 78 | 0.35 | 0.76 | 14 | empty |
| 3 | 60 | 0.30 | 0.75 | 23 | empty |
| 4 | 55 | 0.29 | 0.75 | 14 | empty |
Compared structures
- 1CL6 · Crystal structures of ferric-no complexes of fungal nitric oxide reductase and its SER286… · the same entry in another collection · chain A against A, TM-score 1.00
- P23295 · AlphaFold monomer V2.0 prediction for NADP nitrous oxide-forming nitric oxide reductase… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P23295
- Elsewhere: RCSB PDB 1CL6 · PDBe 1CL6 · UniProt P23295
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