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NMR structure of the E.COLI protein ybia, northeast structural genomics target ET24.

Analyse NMR structure of the E.COLI protein ybia, northeast structural genomics target… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2B3W
Type: protein
Length: 168 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein ybia
UniProt: P30176
Pockets: 1 · best druggability 0.65

Structure

solution nmr · 1 distinct chain · 43% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hypothetical protein ybia	protein	168	43% helix, 11% strand	P30176

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	355	0.65	0.79	29	empty

Compared structures

2B3W · NMR structure of the E.coli protein YbiA, Northeast Structural Genomics target ET24. · the same entry in another collection · chain A against A, TM-score 1.00
P30176 · AlphaFold monomer V2.0 prediction for N-glycosidase ybia (P30176) · a predicted model of the same protein · chain A against A, TM-score 0.86

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P30176
Elsewhere: RCSB PDB 2B3W · PDBe 2B3W · UniProt P30176

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