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Crystal structure for the mutant F117E of thermotoga maritima octaprenyl pyrophosphate synthase
Analyse Crystal structure for the mutant F117E of thermotoga maritima octaprenyl… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2AZL
- Type
- protein
- Length
- 279 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Octoprenyl-diphosphate synthase
- EC
- 2.5.1.11
- Pockets
- 3 · best druggability 0.73
Structure
x-ray diffraction · 1 distinct chain · 74% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Octoprenyl-diphosphate synthase (EC 2.5.1.11) | protein | 279 | 74% helix, 2% strand | — |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 526 | 0.73 | 0.81 | 57 | empty |
| 2 | 171 | 0.50 | 0.76 | 15 | empty |
| 3 | 64 | 0.30 | 0.74 | 15 | empty |
Compared structures
- 2AZL · Crystal structure for the mutant F117E of Thermotoga maritima octaprenyl pyrophosphate… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 2AZL · PDBe 2AZL
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