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Solution structure of URM1 from saccharomyces cerevisiae

Analyse Solution structure of URM1 from saccharomyces cerevisiae in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2AX5
Type: protein
Length: 99 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical 11.0 kda protein in FAA3-MAS3 intergenic region
UniProt: P40554
Pockets: 2 · best druggability 0.33

Structure

solution nmr · 1 distinct chain · 24% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hypothetical 11.0 kda protein in FAA3-MAS3 intergenic region	protein	99	24% helix, 25% strand	P40554

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	58	0.33	0.76	12	empty
2	59	0.29	0.74	11	empty

Compared structures

2AX5 · Solution Structure of Urm1 from Saccharomyces Cerevisiae · the same entry in another collection · chain A against A, TM-score 1.00
P40554 · AlphaFold monomer V2.0 prediction for ubiquitin-related modifier 1 (P40554) · a predicted model of the same protein · chain A against A, TM-score 0.86

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P40554
Elsewhere: RCSB PDB 2AX5 · PDBe 2AX5 · UniProt P40554

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