Research workbench

NMR structural analysis of archaeal NOP10

Analyse NMR structural analysis of archaeal NOP10 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2AQC
Type: protein
Length: 63 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ribosome biogenesis protein NOP10
UniProt: P81303
Ligands: ZN
Pockets: 1 · best druggability 0.36

Structure

solution nmr · 1 distinct chain · 8% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ribosome biogenesis protein NOP10	protein	63	8% helix, 11% strand	P81303

Ligands and binding sites

ZN · Zinc ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	123	0.36	0.72	16	empty

Compared structures

2AQC · NMR Structural analysis of archaeal Nop10 · the same entry in another collection · chain A against A, TM-score 1.00
P81303 · AlphaFold monomer V2.0 prediction for ribosome biogenesis protein NOP10 (P81303) · a predicted model of the same protein · chain A against A, TM-score 0.49

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P81303
Elsewhere: RCSB PDB 2AQC · PDBe 2AQC · UniProt P81303

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