Research workbench

Solution structure of the R-module from ALGE4

Analyse Solution structure of the R-module from ALGE4 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2AGM
Type: protein
Length: 167 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: POLY(BETA-D-mannuronate) C5 epimerase 4
EC: 5.1.3.-
UniProt: Q44493
Pockets: 1 · best druggability 0.65

Structure

solution nmr · 1 distinct chain · 0% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	POLY(BETA-D-mannuronate) C5 epimerase 4 (EC 5.1.3.-)	protein	167	0% helix, 29% strand	Q44493

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	254	0.65	0.82	33	empty

Compared structures

2AGM · Solution structure of the R-module from AlgE4 · the same entry in another collection · chain A against A, TM-score 1.00
Q44493 · AlphaFold monomer V2.0 prediction for mannuronan C5-epimerase ALGE4 (Q44493) · a predicted model of the same protein · chain A against A, TM-score 0.68

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q44493
Elsewhere: RCSB PDB 2AGM · PDBe 2AGM · UniProt Q44493

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.