Research workbench
Rho transcription termination FACTOR/RNA complex
Analyse Rho transcription termination FACTOR/RNA complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2A8V
- Type
- protein + RNA
- Length
- 363 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-R(P*CP*CP*C)-3'; 5'-R(P*CP*CP*CP*CP*CP*C)-3'; RNA binding domain of rho transcription…
- UniProt
- P03002
Structure
x-ray diffraction · 3 distinct chains · 32% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| D | 5'-R(P*CP*CP*C)-3' | rna | 3 | — | — |
| E | 5'-R(P*CP*CP*CP*CP*CP*C)-3' | rna | 6 | — | — |
| A, B, C | RNA binding domain of rho transcription termination factor | protein | 118 | 32% helix, 25% strand | P03002 |
Interfaces
2 interfaces between chains.
- E–B · 374 Ų buried · 10 hydrogen bonds · protein-nucleic
- D–A · 341 Ų buried · 11 hydrogen bonds · protein-nucleic
Compared structures
- 2A8V · Rho transcription termination FACTOR/RNA complex · the same entry in another collection · chain D against D, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03002
- Elsewhere: RCSB PDB 2A8V · PDBe 2A8V · UniProt P03002
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