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The crystal structure of icam-2

Analyse The crystal structure of icam-2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1ZXQ
Type: protein
Length: 192 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Intercellular adhesion molecule-2
UniProt: P13598
Ligands: NAG

Structure

x-ray diffraction · 1 distinct chain · 6% helix, 60% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Intercellular adhesion molecule-2	protein	192	6% helix, 60% strand	P13598

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 12 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 6 glycan, 3 disulfide (N-glycosylation, disulfide).

Compared structures

1ZXQ · The crystal structure of icam-2 · the same entry in another collection · chain A against A, TM-score 1.00
P13598 · AlphaFold monomer V2.0 prediction for intercellular adhesion molecule 2 (P13598) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P13598
Elsewhere: RCSB PDB 1ZXQ · PDBe 1ZXQ · UniProt P13598

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