Research workbench
Elimination of the C-cap in ubiquitin structure, dynamics and thermodynamic consequences
Analyse Elimination of the C-cap in ubiquitin structure, dynamics and thermodynamic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1ZW7
- Type
- protein
- Length
- 82 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ubiquitin
- UniProt
- P61864
- Pockets
- 1 · best druggability 0.72
Structure
solution nmr · 1 distinct chain · 15% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquitin | protein | 82 | 15% helix, 22% strand | P61864 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 411 | 0.72 | 0.83 | 45 | empty |
Compared structures
- 1ZW7 · Elimination of the C-cap in Ubiquitin Structure, Dynamics and Thermodynamic Consequences · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P61864
- Elsewhere: RCSB PDB 1ZW7 · PDBe 1ZW7 · UniProt P61864
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