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High-resolution structure of yeast MYO5 SH3 domain

Analyse High-resolution structure of yeast MYO5 SH3 domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1ZUY
Type: protein
Length: 116 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Myosin-5 isoform
UniProt: Q04439

Structure

x-ray diffraction · 1 distinct chain · 5% helix, 47% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Myosin-5 isoform	protein	58	5% helix, 47% strand	Q04439

Ligands and binding sites

IPA · Isopropyl alcohol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 500 Å² buried · 5 hydrogen bonds · protein-protein

Compared structures

1ZUY · High-resolution structure of yeast Myo5 SH3 domain · the same entry in another collection · chain B against B, TM-score 1.00
Q04439 · AlphaFold monomer V2.0 prediction for myosin-5 (Q04439) · a predicted model of the same protein · chain A against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q04439
Elsewhere: RCSB PDB 1ZUY · PDBe 1ZUY · UniProt Q04439

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