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Structural basis for shikimate-binding specificity of helicobacter pylori shikimate kinase

Analyse Structural basis for shikimate-binding specificity of helicobacter pylori… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1ZUH
Type: protein
Length: 151 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Shikimate kinase
EC: 2.7.1.71
UniProt: P56073
Pockets: 1 · best druggability 0.39

Structure

x-ray diffraction · 1 distinct chain · 60% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Shikimate kinase (EC 2.7.1.71)	protein	151	60% helix, 15% strand	P56073

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	118	0.39	0.74	21	empty

Compared structures

1ZUH · Structural Basis for Shikimate-binding Specificity of Helicobacter pylori Shikimate Kinase · the same entry in another collection · chain A against A, TM-score 1.00
P56073 · AlphaFold monomer V2.0 prediction for shikimate kinase (P56073) · a predicted model of the same protein · chain A against A, TM-score 0.95

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Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P56073
Elsewhere: RCSB PDB 1ZUH · PDBe 1ZUH · UniProt P56073

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