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The structure of bacillus subtilis recu holliday junction resolvase and its role in substrate selection and sequence specific cleavage.
Analyse The structure of bacillus subtilis recu holliday junction resolvase and its… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1ZP7
- Type
- protein
- Length
- 308 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Recombination protein U
- UniProt
- P39792
- Pockets
- 4 · best druggability 0.51
Structure
x-ray diffraction · 2 distinct chains · 36% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Recombination protein U | protein | 153 | 37% helix, 27% strand | P39792 |
| B | Recombination protein U | protein | 155 | 35% helix, 30% strand | P39792 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 221 | 0.51 | 0.76 | 33 | empty |
| 2 | 208 | 0.50 | 0.76 | 34 | empty |
| 3 | 57 | 0.28 | 0.74 | 14 | empty |
| 4 | 51 | 0.26 | 0.74 | 19 | empty |
Interfaces
1 interface between chains.
- A–B · 1127 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
- 1ZP7 · The structure of Bacillus subtilis RecU Holliday junction resolvase and its role in… · the same entry in another collection · chain A against A, TM-score 1.00
- P39792 · AlphaFold monomer V2.0 prediction for holliday junction resolvase recu (P39792) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P39792
- Elsewhere: RCSB PDB 1ZP7 · PDBe 1ZP7 · UniProt P39792
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