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PDZ1 domain of synapse associated protein 97

Analyse PDZ1 domain of synapse associated protein 97 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1ZOK
Type: protein
Length: 93 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Presynaptic protein SAP97
UniProt: Q62696
Pockets: 2 · best druggability 0.67

Structure

solution nmr · 1 distinct chain · 15% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Presynaptic protein SAP97	protein	93	15% helix, 23% strand	Q62696

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	75	0.67	0.93	31	empty
2	73	0.33	0.75	17	empty

Compared structures

1ZOK · PDZ1 Domain Of Synapse Associated Protein 97 · the same entry in another collection · chain A against A, TM-score 1.00
Q62696 · AlphaFold monomer V2.0 prediction for disks large homolog 1 (Q62696) · a predicted model of the same protein · chain A against A, TM-score 0.68

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q62696
Elsewhere: RCSB PDB 1ZOK · PDBe 1ZOK · UniProt Q62696

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