Research workbench
A zinc finger with an artificial beta-turn, original sequence taken from the third zinc finger domain of the human transcriptional repressor protein YY1 (ying and yang 1, a delta transcription factor), NMR, 34 structures
Analyse A zinc finger with an artificial beta-turn, original sequence taken from the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1ZNM
- Type
- protein
- Length
- 27 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- YY1
- UniProt
- P25490
- Ligands
- ZN
Structure
solution nmr · 1 distinct chain · 44% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | YY1 | protein | 27 | 44% helix, 0% strand | P25490 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 modified (nonstandard).
Compared structures
- 1ZNM · A zinc finger with an artificial beta-turn, original sequence taken from the third zinc… · the same entry in another collection · chain A against A, TM-score 1.00
- P25490 · AlphaFold monomer V2.0 prediction for transcriptional repressor protein YY1 (P25490) · a predicted model of the same protein · chain A against A, TM-score 0.44
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25490
- Elsewhere: RCSB PDB 1ZNM · PDBe 1ZNM · UniProt P25490
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.