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Apo crystal structure of nuclease a from anabaena sp.

Analyse Apo crystal structure of nuclease a from anabaena sp. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1ZM8
Type: protein
Length: 239 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Nuclease
EC: 3.1.30.-
UniProt: P38446
Ligands: MN, NA, SO4

Structure

x-ray diffraction · 1 distinct chain · 28% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Nuclease (EC 3.1.30.-)	protein	239	28% helix, 23% strand	P38446

Ligands and binding sites

MN · Manganese (II) ion · metal · 3 copies · chains A
NA · Sodium ion · metal · chains A
SO4 · Sulfate ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

1ZM8 · Apo Crystal structure of Nuclease A from Anabaena sp. · the same entry in another collection · chain A against A, TM-score 1.00
P38446 · AlphaFold monomer V2.0 prediction for nuclease (P38446) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P38446
Elsewhere: RCSB PDB 1ZM8 · PDBe 1ZM8 · UniProt P38446

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