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Crystal structure of a rgd-containing host-selective toxin: pyrenophora tritici-repentis ptr toxa
Analyse Crystal structure of a rgd-containing host-selective toxin: pyrenophora… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1ZLD
- Type
- protein
- Length
- 103 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ptr necrosis toxin
- UniProt
- P78737
- Ligands
- SO4
Structure
x-ray diffraction · 1 distinct chain · 4% helix, 56% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ptr necrosis toxin | protein | 103 | 4% helix, 56% strand | P78737 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 modified (cyclization).
Compared structures
- 1ZLD · Crystal structure of a RGD-containing host-selective toxin: Pyrenophora tritici-repentis… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P78737
- Elsewhere: RCSB PDB 1ZLD · PDBe 1ZLD · UniProt P78737
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