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Orthorhombic crystal structure of the apo-form of R-specific alcohol dehydrogenase (mutant G37D) from lactobacillus brevis
Analyse Orthorhombic crystal structure of the apo-form of R-specific alcohol… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1ZK2
- Type
- protein
- Length
- 251 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- R-specific alcohol dehydrogenase
- EC
- 1.1.1.2
- UniProt
- Q84EX5
- Ligands
- MG
- Pockets
- 1 · best druggability 0.70
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | R-specific alcohol dehydrogenase (EC 1.1.1.2) | protein | 251 | 45% helix, 16% strand | Q84EX5 |
Ligands and binding sites
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 555 | 0.70 | 0.79 | 44 | empty |
Compared structures
- 1ZK2 · Orthorhombic crystal structure of the apo-form of R-specific alcohol dehydrogenase… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q84EX5
- Elsewhere: RCSB PDB 1ZK2 · PDBe 1ZK2 · UniProt Q84EX5
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