Research workbench
Glucosamine-6-phosphate deaminase from E.COLI, T conformer
Analyse Glucosamine-6-phosphate deaminase from E.COLI, T conformer in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1CD5
- Type
- protein
- Length
- 266 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein (glucosamine 6-phosphate deaminase)
- EC
- 5.3.1.10
- UniProt
- P0A759
- Pockets
- 1 · best druggability 0.68
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein (glucosamine 6-phosphate deaminase) (EC 5.3.1.10) | protein | 266 | 42% helix, 15% strand | P0A759 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 346 | 0.68 | 0.81 | 42 | empty |
Compared structures
- 1CD5 · Glucosamine-6-phosphate deaminase from E.COLI, T conformer · the same entry in another collection · chain A against A, TM-score 1.00
- P0A759 · AlphaFold monomer V2.0 prediction for glucosamine-6-phosphate deaminase (P0A759) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A759
- Elsewhere: RCSB PDB 1CD5 · PDBe 1CD5 · UniProt P0A759
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.