Research workbench
Sulfolobus solfataricus SWI2/SNF2 ATPase core domain
Analyse Sulfolobus solfataricus SWI2/SNF2 ATPase core domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1Z6A
- Type
- protein
- Length
- 480 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Helicase of the SNF2/RAD54 family
- UniProt
- Q97XQ5
- Ligands
- HG, PO4
- Pockets
- 8 · best druggability 0.75
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Helicase of the SNF2/RAD54 family | protein | 480 | 43% helix, 12% strand | Q97XQ5 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 692 | 0.75 | 0.81 | 69 | PO4 |
| 2 | 147 | 0.62 | 0.85 | 24 | empty |
| 3 | 248 | 0.59 | 0.79 | 22 | empty |
| 4 | 159 | 0.51 | 0.78 | 26 | empty |
| 5 | 59 | 0.36 | 0.79 | 12 | empty |
Compared structures
- 1Z6A · Sulfolobus solfataricus SWI2/SNF2 ATPase core domain · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q97XQ5
- Elsewhere: RCSB PDB 1Z6A · PDBe 1Z6A · UniProt Q97XQ5
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