Research workbench
Crystal structure of transcriptional regulator from bacillus halodurans C-125
Analyse Crystal structure of transcriptional regulator from bacillus halodurans C-125 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1Z4E
- Type
- protein
- Length
- 300 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcriptional regulator
- UniProt
- Q9KBG0
- Pockets
- 4 · best druggability 0.69
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Transcriptional regulator | protein | 150 | 37% helix, 35% strand | Q9KBG0 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 359 | 0.69 | 0.82 | 48 | empty |
| 2 | 51 | 0.65 | 0.96 | 20 | empty |
| 3 | 296 | 0.64 | 0.81 | 46 | empty |
| 4 | 76 | 0.45 | 0.82 | 19 | empty |
Interfaces
1 interface between chains.
- A–B · 2953 Ų buried · 62 hydrogen bonds · protein-protein
Compared structures
- 1Z4E · Crystal structure of transcriptional regulator from Bacillus halodurans C-125 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KBG0
- Elsewhere: RCSB PDB 1Z4E · PDBe 1Z4E · UniProt Q9KBG0
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