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The 1.1A crystallographic structure of ubiquitin-conjugating enzyme (ubc-2) from caenorhabditis elegans: functional and evolutionary significance
Analyse The 1.1A crystallographic structure of ubiquitin-conjugating enzyme (ubc-2)… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1Z2U
- Type
- protein
- Length
- 150 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ubiquitin-conjugating enzyme E2 2
- EC
- 6.3.2.19
- UniProt
- P35129
- Ligands
- NA, UNX, CL
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19) | protein | 150 | 37% helix, 21% strand | P35129 |
Ligands and binding sites
- NA · Sodium ion · metal · chains A
- UNX · Unknown atom or ion · ion · 10 copies · chains A
- CL · Chloride ion · ion · 6 copies · chains A
- BU3 · (R,R)-2,3-butanediol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1Z2U · The 1.1A crystallographic structure of ubiquitin-conjugating enzyme (ubc-2) from… · the same entry in another collection · chain A against A, TM-score 1.00
- P35129 · AlphaFold monomer V2.0 prediction for ubiquitin-conjugating enzyme E2 2 (P35129) · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P35129
- Elsewhere: RCSB PDB 1Z2U · PDBe 1Z2U · UniProt P35129
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