Research workbench
Structure of domain of unknown function DUF77 from bacillus cereus
Analyse Structure of domain of unknown function DUF77 from bacillus cereus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1YQH
- Type
- protein
- Length
- 205 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ig hypothetical 16092
- UniProt
- Q81IG4
- Pockets
- 2 · best druggability 0.64
Structure
x-ray diffraction · 2 distinct chains · 39% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ig hypothetical 16092 | protein | 104 | 38% helix, 27% strand | Q81IG4 |
| B | Ig hypothetical 16092 | protein | 101 | 40% helix, 30% strand | Q81IG4 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 168 | 0.64 | 0.85 | 24 | empty |
| 2 | 169 | 0.63 | 0.84 | 26 | empty |
Interfaces
1 interface between chains.
- A–B · 1226 Ų buried · 17 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 6 modified (engineered).
Compared structures
- 1YQH · Structure of domain of unknown function DUF77 from Bacillus cereus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q81IG4
- Elsewhere: RCSB PDB 1YQH · PDBe 1YQH · UniProt Q81IG4
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