Research workbench
3D solution structure of [TYR3]OCTREOTATE derivatives in dmso
Analyse 3D solution structure of [TYR3]OCTREOTATE derivatives in dmso in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1YL9
- Type
- protein
- Length
- 8 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- [TYR3]OCTREOTATE
- Ligands
- CH4
Structure
solution nmr · 1 distinct chain · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | [TYR3]OCTREOTATE | protein | 8 | 0% helix, 0% strand | — |
Ligands and binding sites
- CH4 · 3-[(2-aminoethyl)amino]-2-{[(2-aminoethyl)amino]methyl}propanal · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 2 d-amino, 1 covalent, 1 disulfide (D-amino acid, covalent ligand, disulfide).
Compared structures
- 1YL9 · 3D Solution Structure of [Tyr3]Octreotate derivatives in DMSO · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1YL9 · PDBe 1YL9
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