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Crystal structure of clindamycin bound to the G2099A mutant 50S ribosomal subunit of haloarcula marismortui

Analyse Crystal structure of clindamycin bound to the G2099A mutant 50S ribosomal… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1YJN
Type
protein + RNA
Length
6,651 residues
Chains
31
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P20276, P12735, P14124, P14135, P12743, P15825, P29198, P22450, P12737, P14123, P12733, P14119, P12734, P10970, P12732, P10972, P14116, P10971, P14121, P18138, P12736, P32410, P22452, P32411

Structure

x-ray diffraction · 31 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
0—rna2754——
9—rna122——
A—protein237—P20276
B—protein337——
C—protein246—P12735
D—protein140—P14124
E—protein172—P14135
F—protein119—P12743
G—protein29—P15825
H—protein160——
I—protein70——
J—protein142—P29198
K—protein132—P22450
L—protein145—P12737
M—protein194——
N—protein186—P14123
O—protein115—P12733
P—protein143—P14119
Q—protein95—P12734
R—protein150—P10970
S—protein81—P12732
T—protein119—P10972
U—protein53—P14116
V—protein65—P10971
W—protein154—P14121
X—protein82—P18138
Y—protein142—P12736
Z—protein73——
1—protein56—P32410
2—protein46—P22452
3—protein92—P32411

Compared structures

  • 1YJN · Crystal Structure Of Clindamycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of… · the same entry in another collection · chain 9 against 9, TM-score 1.00

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