Research workbench
Solution NMR structure of protein yggu from escherichia COLI. northeast structural genomics consortium target ER14.
Analyse Solution NMR structure of protein yggu from escherichia COLI. northeast… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1YH5
- Type
- protein
- Length
- 108 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Orf, hypothetical protein
- UniProt
- Q8XCU6
- Pockets
- 2 · best druggability 0.59
Structure
solution nmr · 1 distinct chain · 15% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Orf, hypothetical protein | protein | 108 | 15% helix, 24% strand | Q8XCU6 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 154 | 0.59 | 0.82 | 35 | empty |
| 2 | 58 | 0.54 | 0.88 | 17 | empty |
Compared structures
- 1YH5 · Solution NMR Structure of Protein yggU from Escherichia coli. Northeast Structural… · the same entry in another collection · chain A against A, TM-score 1.00
- Q8XCU6 · AlphaFold monomer V2.0 prediction for UPF0235 protein yggu (Q8XCU6) · a predicted model of the same protein · chain A against A, TM-score 0.72
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8XCU6
- Elsewhere: RCSB PDB 1YH5 · PDBe 1YH5 · UniProt Q8XCU6
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