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Structure of the vibrio cholerae virulence activator apha

Analyse Structure of the vibrio cholerae virulence activator apha in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1YG2
Type: protein
Length: 169 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Gene activator apha
UniProt: Q9X399
Pockets: 1 · best druggability 0.46

Structure

x-ray diffraction · 1 distinct chain · 73% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Gene activator apha	protein	169	73% helix, 4% strand	Q9X399

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	147	0.46	0.76	21	empty

Compared structures

1YG2 · Structure of the Vibrio cholerae virulence activator AphA · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9X399
Elsewhere: RCSB PDB 1YG2 · PDBe 1YG2 · UniProt Q9X399

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